Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7EVK

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 78% GTP, 22% GDP, Na+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE TPS 05A
Synchrotron siteNSRRC
BeamlineTPS 05A
Temperature [K]100
Detector technologyCCD
Collection date2021-04-23
DetectorRAYONIX MX-300
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths40.364, 92.731, 103.112
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.200 - 1.750
Rwork0.154
R-free0.18260
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7evc
RMSD bond length0.009
RMSD bond angle1.079
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (v1.17.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.0001.780
High resolution limit [Å]1.7501.750
Rmerge0.0650.433
Rmeas0.0750.503
Rpim0.0270.253
Number of reflections395111519
<I/σ(I)>25.11.3
Completeness [%]98.3
Redundancy6.3
CC(1/2)0.829
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529320% PEG 3350, 0.2 M sodium acetate 0.1 M Bis-Tris propane, pH 8.5 soaked with 10 mM GTP, 2 mM EGTA, 100 mM KCl (1 h)

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon