7EVK
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 78% GTP, 22% GDP, Na+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-04-23 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.364, 92.731, 103.112 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.200 - 1.750 |
Rwork | 0.154 |
R-free | 0.18260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7evc |
RMSD bond length | 0.009 |
RMSD bond angle | 1.079 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (v1.17.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.000 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.065 | 0.433 |
Rmeas | 0.075 | 0.503 |
Rpim | 0.027 | 0.253 |
Number of reflections | 39511 | 1519 |
<I/σ(I)> | 25.1 | 1.3 |
Completeness [%] | 98.3 | |
Redundancy | 6.3 | |
CC(1/2) | 0.829 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 20% PEG 3350, 0.2 M sodium acetate 0.1 M Bis-Tris propane, pH 8.5 soaked with 10 mM GTP, 2 mM EGTA, 100 mM KCl (1 h) |