7EVF
Plant growth-promoting factor YxaL mutant from Bacillus velezensis - T175W/S213G/W215A
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100.15 |
Detector technology | CCD |
Collection date | 2020-03-27 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.00003 |
Spacegroup name | H 3 |
Unit cell lengths | 152.987, 152.987, 61.694 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.880 - 1.500 |
R-factor | 0.1505 |
Rwork | 0.150 |
R-free | 0.16480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7dxn |
RMSD bond length | 0.010 |
RMSD bond angle | 1.083 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmeas | 0.320 | |
Rpim | 0.020 | 0.116 |
Number of reflections | 84369 | 4087 |
<I/σ(I)> | 33 | 4.9 |
Completeness [%] | 98.1 | |
Redundancy | 8.3 | |
CC(1/2) | 0.998 | 0.940 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 287.15 | 0.2 M sodium citrate pH 5.8, 16% (w/v) PEG 4000, 20% (v/v) Isopropanol |