7EVE
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 100% GDP and 2 Na+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.130, 88.421, 95.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.500 - 2.000 |
Rwork | 0.211 |
R-free | 0.25310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7evc |
RMSD bond length | 0.002 |
RMSD bond angle | 0.549 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (v1.17.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.000 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.114 | 0.574 |
Rmeas | 0.132 | 0.674 |
Rpim | 0.065 | 0.340 |
Number of reflections | 19846 | 1459 |
<I/σ(I)> | 8.6 | 2.8 |
Completeness [%] | 85.4 | |
Redundancy | 3.5 | |
CC(1/2) | 0.439 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 25% PEG 1500, 0.1 M MMT, pH 9.0 |