7EVB
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 77% GTP/23% and 2 Na+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-04-23 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.327, 92.256, 103.060 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.410 - 1.620 |
Rwork | 0.153 |
R-free | 0.17700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6o2r |
RMSD bond length | 0.006 |
RMSD bond angle | 0.912 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (v1.17.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.000 | 1.650 |
High resolution limit [Å] | 1.620 | 1.620 |
Rmerge | 0.050 | 0.479 |
Rmeas | 0.054 | 0.544 |
Rpim | 0.020 | 0.251 |
Number of reflections | 48739 | 2085 |
<I/σ(I)> | 27.6 | 1.6 |
Completeness [%] | 97.9 | 85.6 |
Redundancy | 6.5 | 3.7 |
CC(1/2) | 0.838 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 20% PEG 3350, 0.2 M sodium acetate, 0.1 M Bis-Tris propane, pH 8.5, soaked with 10 mM GTP for 1 h before freezing |