7EQW

Crystal structure of capsid P domain of norovirus GI.3 DSV complexed with NA2 N-glycan

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	ROTATING ANODE
Source details	RIGAKU MICROMAX-007 HF
Temperature [K]	100
Detector technology	CCD
Collection date	2020-11-12
Detector	RIGAKU SATURN 944
Wavelength(s)	1.5418
Spacegroup name	P 21 21 21
Unit cell lengths	63.292, 100.808, 103.414
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	32.640 - 2.150
R-factor	0.1831
Rwork	0.181
R-free	0.23010
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	7eqs
RMSD bond length	0.005
RMSD bond angle	1.300
Data reduction software	HKL-2000
Data scaling software	HKL-2000
Phasing software	PHASER
Refinement software	REFMAC (5.8.0258)

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	50.000	50.000	2.190
High resolution limit [Å]	2.150	5.830	2.150
Rmerge	0.173	0.104	0.571
Rmeas	0.181	0.109	0.638
Rpim	0.052	0.032	0.272
Total number of observations	379887
Number of reflections	36381	1987	1668
<I/σ(I)>	6.8
Completeness [%]	99.3	99.3	90.9
Redundancy	10.4	11.7	4.6
CC(1/2)		0.990	0.772

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP		293	15.5% (w/v) polyethylene glycol 3350, 0.2M Sodium tartrate dibasic dihydrate