7EQ4
Crystal Structure of the N-terminus of Nonstructural protein 1 from SARS-CoV-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2020-08-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9822 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 36.605, 36.605, 140.546 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.460 - 1.250 |
R-factor | 0.165 |
Rwork | 0.163 |
R-free | 0.19720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hsx |
RMSD bond length | 0.005 |
RMSD bond angle | 0.899 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (7.1.002) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.310 | 8.000 |
High resolution limit [Å] | 1.150 | 1.250 |
Number of reflections | 50465 | 27553 |
<I/σ(I)> | 36.33 | |
Completeness [%] | 99.9 | |
Redundancy | 14 | |
CC(1/2) | 1.000 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 298 | 0.2 M Lithium sulfate monohydrate, 0.1 M Glycine pH 9.5, 30% w/v Polyethylene glycol 4000 |