7EP3
Crystal structure of ZER1 bound to GAGN degron
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2020-12-26 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.979191 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 67.970, 120.420, 68.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.323 - 1.513 |
Rwork | 0.219 |
R-free | 0.25550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ep0 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.752 |
Data reduction software | XDS (0.7.4) |
Data scaling software | XDS (0.7.4) |
Phasing software | PHENIX (1.19.2_4158) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.190 | 1.550 |
High resolution limit [Å] | 1.510 | 1.510 |
Rmerge | 0.038 | 0.440 |
Number of reflections | 43366 | 2864 |
<I/σ(I)> | 30.6 | 2.8 |
Completeness [%] | 98.8 | |
Redundancy | 11 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M Sodium formate, 23% (wt/vol) Polyethylene glycol 3,350, 0.033% (wt/vol) Anthrone, 0.033% (wt/vol) Congo Red, 0.033% (wt/vol) N-(2-Acetamido)-2-aminoethanesulfonic acid, 0.002 M HEPES sodium pH 6.8 |