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7EOO

Crystal structure of the Pepper aptamer in complex with HBC525

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-11-09
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979
Spacegroup nameC 1 2 1
Unit cell lengths92.305, 34.723, 58.130
Unit cell angles90.00, 127.87, 90.00
Refinement procedure
Resolution36.431 - 2.230
R-factor0.2285
Rwork0.227
R-free0.25460
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7eog
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.310
High resolution limit [Å]2.2304.8002.230
Rmerge0.1360.0900.575
Rmeas0.1490.0980.639
Rpim0.0580.0390.271
Total number of observations44622
Number of reflections7136764646
<I/σ(I)>3.5
Completeness [%]97.198.686.8
Redundancy6.36.54.9
CC(1/2)0.9950.820
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2890.1 M ammonium chloride, 0.005 M magnesium chloride, 0.025 M HEPES, pH 7.0, 1.25 M 1,6-hexanediol, 40% MPD

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