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7EMZ

iron and alpha-ketoglutarate-dependent endoperoxidase NvfI W199F variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-27
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.07
Spacegroup nameP 21 21 21
Unit cell lengths47.915, 81.112, 151.780
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.690 - 2.300
R-factor0.1971
Rwork0.193
R-free0.24790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7de2
RMSD bond length0.003
RMSD bond angle0.575
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.9202.380
High resolution limit [Å]2.3002.300
Rmerge0.1360.721
Number of reflections271422614
<I/σ(I)>12.23
Completeness [%]100.0100
Redundancy7.57.9
CC(1/2)0.9960.816
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP28350 mM HEPES pH 7.5, 20% PEG3350, 20 mM alpha-ketoglutarate, 100 mM NaSCN

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