7EIJ
Ancestral L-Lys oxidase K387A variant (L-Arg binding form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-18 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 85.932, 80.093, 88.036 |
Unit cell angles | 90.00, 90.47, 90.00 |
Refinement procedure
Resolution | 48.900 - 2.200 |
R-factor | 0.19241 |
Rwork | 0.190 |
R-free | 0.23083 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7eih |
RMSD bond length | 0.007 |
RMSD bond angle | 1.438 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.900 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.084 | 0.446 |
Number of reflections | 60710 | 8644 |
<I/σ(I)> | 15.2 | 3.9 |
Completeness [%] | 99.7 | |
Redundancy | 6.8 | |
CC(1/2) | 0.998 | 0.899 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 25%(w/v) PEG3350, 0.1 M Tris-HCl (pH 8.5) |