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7EFN

Crystal structure of the gastric proton pump K791S/E820D/Y340N/E936V in (BYK)E2BeF state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]80
Detector technologyPIXEL
Collection date2020-10-15
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 31 2 1
Unit cell lengths105.940, 105.940, 372.010
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.710 - 3.200
R-factor0.2704
Rwork0.268
R-free0.30810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ylv
RMSD bond length0.004
RMSD bond angle0.895
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.7103.300
High resolution limit [Å]3.2003.200
Rmerge0.0332.600
Rpim0.0332.600
Number of reflections410731017
<I/σ(I)>9.150.28
Completeness [%]81.725.24
Redundancy2
CC(1/2)1.0000.160
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529310 glycerol, 20% PEG 2000 MME, 0.2M RbCl, 3% methylpentanediol, 5mM beta-mercaptoethanol

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