Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7EDD

Crystal structure of a serine protease from Streptococcus pyogenes

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-19
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 62 2 2
Unit cell lengths191.969, 191.969, 252.788
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.370 - 2.897
R-factor0.198
Rwork0.195
R-free0.25480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5xyr
RMSD bond length0.016
RMSD bond angle1.583
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.950
High resolution limit [Å]2.8972.900
Rmerge0.1900.960
Number of reflections609442973
<I/σ(I)>17.5
Completeness [%]100.0
Redundancy19
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.652960.2 M MgCl Hexahydrate, 0.1 M Tris pH 8.65, 28% PEG 3500

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon