7ECJ
RNA duplex containing C-A base pairs
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-25 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.1 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 47.780, 47.780, 186.215 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.550 - 3.100 |
R-factor | 0.2364 |
Rwork | 0.231 |
R-free | 0.28290 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.550 | 46.550 | 3.180 |
High resolution limit [Å] | 3.100 | 13.880 | 3.100 |
Rmerge | 0.070 | 0.030 | 0.415 |
Rmeas | 0.075 | 0.034 | 0.439 |
Total number of observations | 22964 | ||
Number of reflections | 2674 | 46 | 202 |
<I/σ(I)> | 21.51 | 44.63 | 5.14 |
Completeness [%] | 99.7 | 97.9 | 99 |
Redundancy | 8.588 | 4.5 | 9.475 |
CC(1/2) | 0.999 | 0.999 | 0.993 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | MPD, sodium cacodylate, spermine tetrahydrochloride, lithium nitrate |