Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7EAF

Crystal structure of SAM-I riboswitch with the Actinomyces-1 k-turn

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-01-22
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9785
Spacegroup nameP 43 21 2
Unit cell lengths61.460, 61.460, 157.910
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.220 - 2.850
R-factor0.2639
Rwork0.262
R-free0.29760
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5fk3
RMSD bond length0.004
RMSD bond angle0.965
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.1_4122)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.950
High resolution limit [Å]2.8002.800
Rmeas0.154
Rpim0.0560.656
Number of reflections79631123
<I/σ(I)>8.91.4
Completeness [%]99.699.6
Redundancy7.27.7
CC(1/2)0.9900.771
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729040 MM NA-CACODYLATE (PH 7.0), 80 MM KCL, 40 MM BACL2, 12 MM SPERMINE-HCL, 12% (V/V) MPD.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon