7EA6
Crystal structure of TCR-017 ectodomain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2021-02-27 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.07 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.049, 81.175, 315.105 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.418 - 2.180 |
R-factor | 0.224406282572 |
Rwork | 0.222 |
R-free | 0.27612 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5c0b |
RMSD bond length | 0.008 |
RMSD bond angle | 1.038 |
Data reduction software | PHENIX (1.12_2829) |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.370 | 2.300 |
High resolution limit [Å] | 2.180 | 2.180 |
Rmerge | 0.093 | 0.816 |
Rmeas | 0.100 | 0.880 |
Rpim | 0.038 | 0.328 |
Number of reflections | 371960 | 7915 |
<I/σ(I)> | 13.7 | 2.3 |
Completeness [%] | 99.8 | 99.6 |
Redundancy | 6.8 | 7.1 |
CC(1/2) | 0.998 | 0.819 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.1M Hepes (pH 7.0), 1.1M sodium malonate |