7E6Y
Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin: 1 microsecond structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | SACLA BEAMLINE BL3 |
Synchrotron site | SACLA |
Beamline | BL3 |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2016-10-12 |
Detector | MPCCD |
Wavelength(s) | 1.77 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 61.800, 142.200, 94.700 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 14.960 - 2.500 |
R-factor | 0.4485 |
Rwork | 0.445 |
R-free | 0.51480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ug9 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.595 |
Data reduction software | CrystFEL (0.6.3) |
Data scaling software | CrystFEL (0.6.3) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.410 | 39.526 | 2.441 |
High resolution limit [Å] | 2.400 | 6.506 | 2.400 |
Number of reflections | 16730 | 916 | 808 |
<I/σ(I)> | 6.15 | 13.21 | 0.86 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 131.1 | 344.4 | 37.8 |
CC(1/2) | 0.987 | 0.979 | 0.439 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 6.9 | 293 | 100 mM MES, pH 6.9, 100 mM Na formate, and 30% PEG500DM |