7E6R
Crystal structure of HCoV-NL63 3C-like protease,pH5.6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-01-05 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.136, 82.902, 63.902 |
Unit cell angles | 90.00, 108.71, 90.00 |
Refinement procedure
Resolution | 60.520 - 1.900 |
R-factor | 0.188700271271 |
Rwork | 0.187 |
R-free | 0.22244 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7e6l |
RMSD bond length | 0.007 |
RMSD bond angle | 0.880 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.520 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.075 | |
Number of reflections | 49375 | 3558 |
<I/σ(I)> | 16.5 | |
Completeness [%] | 99.6 | |
Redundancy | 5.8 | |
CC(1/2) | 0.398 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M Sodium citrate, pH5.6, 2% Tacsimate(pH5.0), 16% PEG3350 |