7E5Q
Crystal Structure of Dye Decolorizing peroxidase from Bacillus subtilis at acidic pH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-18 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 0.96770 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.855, 117.342, 135.441 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.344 - 1.900 |
R-factor | 0.1823 |
Rwork | 0.180 |
R-free | 0.23270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kmm |
RMSD bond length | 0.006 |
RMSD bond angle | 0.847 |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.344 | 1.960 |
High resolution limit [Å] | 1.900 | 1.900 |
Number of reflections | 52281 | 7225 |
<I/σ(I)> | 8.8 | |
Completeness [%] | 99.4 | 5.8 |
Redundancy | 6.8 | |
CC(1/2) | 0.980 | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 293 | 0.1M Sodium citrate, 1M LiCl, 20% PEG 6000 |