7E2M
Crystal structure of the RWD domain of human GCN2 - 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97895 |
Spacegroup name | P 63 |
Unit cell lengths | 158.440, 158.440, 54.500 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.901 - 2.350 |
R-factor | 0.2358 |
Rwork | 0.234 |
R-free | 0.26110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7e2k |
Data scaling software | Aimless (0.7.2) |
Refinement software | PHENIX (1.13) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.901 | 44.900 | 2.410 |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.193 | 0.082 | 1.301 |
Rmeas | 0.202 | 0.086 | 1.368 |
Rpim | 0.060 | 0.027 | 0.419 |
Total number of observations | 4034 | 25379 | |
Number of reflections | 63134 | 391 | 2376 |
<I/σ(I)> | 10.9 | 18 | 2.5 |
Completeness [%] | 99.3 | 96 | 99.4 |
Redundancy | 11.2 | 10.3 | 10.7 |
CC(1/2) | 0.994 | 0.998 | 0.399 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1 M sodium citrate pH 7.0, 20 % PEG4000, and 20 % 2-propanol |