7E1B
Crystal structure of VbrR-DNA complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U1 |
| Synchrotron site | SSRF |
| Beamline | BL17U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-04-11 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97818 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 329.942, 114.064, 114.036 |
| Unit cell angles | 90.00, 110.02, 90.00 |
Refinement procedure
| Resolution | 46.006 - 4.587 |
| R-factor | 0.2766 |
| Rwork | 0.265 |
| R-free | 0.32060 |
| Structure solution method | SAD |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 4.760 |
| High resolution limit [Å] | 4.587 | 9.890 | 4.600 |
| Rmerge | 0.065 | 0.026 | 1.024 |
| Rmeas | 0.078 | 0.032 | 1.250 |
| Rpim | 0.042 | 0.017 | 0.708 |
| Number of reflections | 15995 | 2370 | 1677 |
| <I/σ(I)> | 7.2 | ||
| Completeness [%] | 93.7 | 98.4 | 72.7 |
| Redundancy | 3.2 | 3.1 | 2.8 |
| CC(1/2) | 0.998 | 0.534 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M NaCl, 0.1 M MES pH 6.6, and 20% PEG4000 |






