7E0L
Class III hybrid cluster protein (HCP) from Methanothermobacter marburgensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-20 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.73937 |
Spacegroup name | P 43 |
Unit cell lengths | 67.950, 67.950, 469.260 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.050 - 2.820 |
R-factor | 0.2353 |
Rwork | 0.234 |
R-free | 0.25930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1w9m |
RMSD bond length | 0.004 |
RMSD bond angle | 0.834 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1-4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.050 | 48.050 | 2.920 |
High resolution limit [Å] | 2.820 | 10.000 | 2.820 |
Rmerge | 0.185 | 0.088 | 0.953 |
Rmeas | 0.193 | 0.092 | 0.996 |
Number of reflections | 50758 | 1138 | 5017 |
<I/σ(I)> | 9.91 | 21.86 | 2.2 |
Completeness [%] | 100.0 | 98.5 | 100 |
Redundancy | 12.401 | 13.402 | 11.855 |
CC(1/2) | 0.989 | 0.982 | 0.734 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 30 % (w/v) Polyethylene glycol 4000, 100 mM Tris-HCl, 200 mM Sodium acetate |