7DUH
Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-19 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9898 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 400.830, 400.830, 174.670 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.830 - 3.750 |
R-factor | 0.188 |
Rwork | 0.188 |
R-free | 0.23000 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (DEV-3318) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.834 | 3.000 |
High resolution limit [Å] | 2.920 | 2.920 |
Rmerge | 1.642 | 9.102 |
Number of reflections | 284866 | 16331 |
<I/σ(I)> | 4.96 | |
Completeness [%] | 94.0 | 73.5 |
Redundancy | 68.44 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 17% MPD |