7DU3
ThiL in complex with AMP-PNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2020-11-29 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 112.820, 115.800, 132.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.590 - 2.540 |
R-factor | 0.1733 |
Rwork | 0.171 |
R-free | 0.20980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6xep |
RMSD bond length | 0.009 |
RMSD bond angle | 1.087 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.000 | 2.634 |
High resolution limit [Å] | 2.500 | 2.543 |
Rmerge | 0.175 | 1.367 |
Rmeas | 0.182 | |
Rpim | 0.049 | 0.388 |
Number of reflections | 28688 | 2670 |
<I/σ(I)> | 16.75 | 2.23 |
Completeness [%] | 99.3 | 93.55 |
Redundancy | 13.7 | 12.8 |
CC(1/2) | 0.998 | 0.732 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293.15 | 0.02M DL-glutamic acid monohydrate, 0.02M DL-alanine, 0.02M glycine, 0.02M DL-lysine monohydrochloride, 0.02M DL-serine, 0.061M Tris, 0.039M Bicine, pH 8.5, 20% v/v PEG 500 MME, 10% w/v PEG 20000 |