7DRU
Crystal Structure of the Dog Lipocalin Allergen Can f 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-22 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 68.026, 128.748, 68.605 |
Unit cell angles | 90.00, 97.73, 90.00 |
Refinement procedure
Resolution | 47.780 - 2.500 |
R-factor | 0.2456 |
Rwork | 0.243 |
R-free | 0.28570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eyc |
RMSD bond length | 0.007 |
RMSD bond angle | 0.895 |
Data scaling software | XDS (2017-10-10) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.800 | 2.650 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 40304 | 6485 |
<I/σ(I)> | 16 | 2.4 |
Completeness [%] | 99.2 | 99 |
Redundancy | 3.5 | 3.6 |
CC(1/2) | 0.999 | 0.859 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1M imidazole (pH 6.5), 30% PEG3350, 6% isopropanol, 0.1 M CaCl2 |