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7DRM

Structure of ATP-grasp ligase PsnB complexed with minimal precursor, Mg, and ADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2018-10-18
DetectorADSC QUANTUM 270
Wavelength(s)0.97934
Spacegroup nameP 1 21 1
Unit cell lengths92.432, 91.294, 100.308
Unit cell angles90.00, 101.16, 90.00
Refinement procedure
Resolution32.830 - 3.280
R-factor0.251
Rwork0.251
R-free0.25910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ig9
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.1_4122)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]32.83032.8303.360
High resolution limit [Å]3.2808.9403.280
Rmerge0.1390.0630.656
Rmeas0.1500.0690.704
Rpim0.0550.0260.256
Number of reflections2513513031270
<I/σ(I)>10.1
Completeness [%]99.998.3100
Redundancy7.46.77.5
CC(1/2)0.9950.922
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.4293Sodium acetate, PEG3350

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