7DQF
E. coli GyrB ATPase domain in complex with methyl 2,4-dihydroxybenzoate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97907 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.096, 68.159, 102.397 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.740 - 1.800 |
R-factor | 0.21967 |
Rwork | 0.218 |
R-free | 0.24933 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5z9b |
RMSD bond length | 0.017 |
RMSD bond angle | 1.447 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.740 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Number of reflections | 40376 | 1984 |
<I/σ(I)> | 22.88 | |
Completeness [%] | 99.7 | |
Redundancy | 6.6 | |
CC(1/2) | 0.976 | 0.891 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.1 M Tris-HCl pH 7.5, 2.20 M (NH4)2HPO4, 10 mM 2-aminobenzimidazole |