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7DO7

Crystal structure of Azotobacter vinelandii L-rhamnose 1-dehydrogenase(NAD and L-rhamnose bound-form)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL45XU
Synchrotron siteSPring-8
BeamlineBL45XU
Temperature [K]100
Detector technologyPIXEL
Collection date2020-07-20
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.0000
Spacegroup nameP 21 21 2
Unit cell lengths68.470, 97.931, 70.302
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.989 - 1.570
R-factor0.2243
Rwork0.223
R-free0.25880
Structure solution methodMOLECULAR REPLACEMENT
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00048.9701.600
High resolution limit [Å]1.5708.6001.570
Rmerge0.2910.0701.008
Rmeas0.3030.0731.046
Rpim0.0810.0190.278
Total number of observations558645576
Number of reflections667164813285
<I/σ(I)>8.718.71.9
Completeness [%]100.099.2100
Redundancy13.711.613.9
CC(1/2)0.9910.9990.886
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M Tris-HCl (pH 8.0), 0.2 M NaCl, 24.5% (w/v) PEG 3350

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