7DM2
crystal structure of the M. tuberculosis phosphate ABC transport receptor PstS-1 in complex with Fab p4-170
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 |
Unit cell lengths | 56.405, 56.734, 65.852 |
Unit cell angles | 102.34, 110.26, 93.21 |
Refinement procedure
Resolution | 28.080 - 2.400 |
R-factor | 0.1726 |
Rwork | 0.170 |
R-free | 0.21620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1pc3 |
Data scaling software | Aimless (0.7.4) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.860 | 54.860 | 2.160 |
High resolution limit [Å] | 2.050 | 6.480 | 2.050 |
Rmerge | 0.049 | 0.029 | 0.273 |
Rmeas | 0.063 | 0.037 | 0.363 |
Rpim | 0.038 | 0.023 | 0.236 |
Total number of observations | 76615 | 3349 | 3008 |
Number of reflections | 35104 | 1432 | 1852 |
<I/σ(I)> | 11.6 | 24 | 2.8 |
Completeness [%] | 75.5 | 97.7 | 27.3 |
Redundancy | 2.2 | 2.3 | 1.6 |
CC(1/2) | 0.997 | 0.998 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M lithium sulfate, 0.1 M Tris pH 8.5, 25% (w/v) polyethylene glycol 3350 |