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7DLA

Crystal structure of nucleoside transporter NupG (D323A mutant)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-30
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9791
Spacegroup nameC 1 2 1
Unit cell lengths145.332, 47.096, 63.383
Unit cell angles90.00, 94.90, 90.00
Refinement procedure
Resolution19.766 - 3.000
R-factor0.2382
Rwork0.234
R-free0.27690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Predict model from robetta webiste
Data reduction softwareXDS
Data scaling softwareAimless (0.7.3)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.77019.7703.180
High resolution limit [Å]3.0009.0003.000
Rmerge0.1730.0630.983
Rmeas0.1910.0711.082
Rpim0.0810.0320.444
Total number of observations4734115187908
Number of reflections87473181409
<I/σ(I)>7.523.81.7
Completeness [%]99.690.799.9
Redundancy5.44.85.6
CC(1/2)0.9950.9940.823
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE2930.1 M NaCl, 0.1 M MgCl2, 0.1M MES pH6.0, 30% PEG550MME

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PDB entries from 2026-01-21

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