7DKD
Stenotrophomonas maltophilia DPP7 in complex with Asn-Tyr
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2019-01-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 68.552, 74.892, 154.647 |
Unit cell angles | 90.00, 94.50, 90.00 |
Refinement procedure
Resolution | 40.003 - 1.920 |
Rwork | 0.202 |
R-free | 0.24780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7dkb |
RMSD bond length | 0.009 |
RMSD bond angle | 1.554 |
Data reduction software | xia2 (0.5.764) |
Data scaling software | DIALS (1.12.2) |
Phasing software | REFMAC (5.8.0267) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.480 | 1.950 |
High resolution limit [Å] | 1.920 | 1.920 |
Rmerge | 0.186 | 1.199 |
Rpim | 0.076 | 0.485 |
Number of reflections | 119220 | 39675 |
<I/σ(I)> | 7.4 | 2 |
Completeness [%] | 99.7 | 94.8 |
Redundancy | 6.9 | 7 |
CC(1/2) | 0.989 | 0.632 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.2M Ca Acetate, 20%w/v PEG 8000 |