7DI1
Crystal structure of the rationally designed mkDPBB_sym_86 protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-11-01 |
Detector | RAYONIX MX225-HS |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 31.238, 85.302, 32.604 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.455 - 2.097 |
R-factor | 0.2108 |
Rwork | 0.205 |
R-free | 0.26410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7dg7 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.078 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.220 |
High resolution limit [Å] | 2.097 | 2.097 |
Number of reflections | 8524 | 1471 |
<I/σ(I)> | 12.8 | |
Completeness [%] | 84.8 | |
Redundancy | 7.67 | |
CC(1/2) | 0.997 | 0.833 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 100mM HEPES pH 7.0, 15% PEG 20000 |