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7DGC

The structure of the Arabidopsis thaliana guanosine deaminase in reaction with 2'-O-Methylguanosine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-04-17
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.979
Spacegroup nameP 61
Unit cell lengths119.052, 119.052, 39.809
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution31.510 - 2.100
R-factor0.1847
Rwork0.183
R-free0.21920
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7dbf
RMSD bond length0.002
RMSD bond angle0.480
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.180
High resolution limit [Å]2.1002.100
Rmerge0.2430.901
Number of reflections190021824
<I/σ(I)>19.142.14
Completeness [%]99.998.8
Redundancy16.910
CC(1/2)0.9810.753
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52771.2 M Na-citrate and 0.1 M HEPES (pH 7.5)

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PDB entries from 2024-07-17

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