Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7DFT

Crystal structure of Xanthomonas oryzae ClpP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-05-10
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9735
Spacegroup nameP 42 21 2
Unit cell lengths132.548, 132.548, 187.400
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.639 - 1.800
R-factor0.1883
Rwork0.186
R-free0.22240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3sta
RMSD bond length0.008
RMSD bond angle0.881
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0001.860
High resolution limit [Å]1.7913.8801.800
Rmerge0.0910.0520.531
Rmeas0.0940.0530.562
Rpim0.0210.0110.174
Number of reflections1541531622414800
<I/σ(I)>6.7
Completeness [%]99.499.996.9
Redundancy16.9249.5
CC(1/2)0.9990.257
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2890.1 M Sodium acetate trihydrate, 3.0 M Sodium chloride

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon