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7DDF

Crystal structures of Na+,K+-ATPase in complex with beryllium fluoride

Replaces:  6KPU
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyPIXEL
Collection date2014-06-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths114.481, 118.371, 495.388
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.990 - 4.620
R-factor0.1957
Rwork0.194
R-free0.24150
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3a3y
RMSD bond length0.007
RMSD bond angle1.020
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0005.270
High resolution limit [Å]4.6004.600
Rmerge0.1610.612
Number of reflections12110583
<I/σ(I)>6.9
Completeness [%]31.8
Redundancy4.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.128816% PEG 2000 MME, 10% GLYCEROL, 200mM MAGNESIUM CHLORIDE, 5mM GSH, 0.1mM DTT, 0.0001% BHT, 100mM MES-NMDG, PH 6.2

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