7DBO
DPBB domain of VCP-like ATPase from Thermoplasma acidophilum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-02-05 |
Detector | RAYONIX MX225-HS |
Wavelength(s) | 0.979000 |
Spacegroup name | H 3 2 |
Unit cell lengths | 118.800, 118.800, 68.200 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.070 - 1.900 |
R-factor | 0.2217 |
Rwork | 0.217 |
R-free | 0.26420 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | AutoSol |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.020 |
High resolution limit [Å] | 1.900 | 1.900 |
Number of reflections | 14642 | 2292 |
<I/σ(I)> | 7.69 | 1.21 |
Completeness [%] | 99.7 | |
Redundancy | 22.1 | |
CC(1/2) | 0.995 | 0.615 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 100mM citrate / phosphate pH5.0, 1.4M Ammonium sulfate |