Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7DBA

RYX in complex with tubulin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-15
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9785
Spacegroup nameP 21 21 21
Unit cell lengths105.449, 158.876, 181.608
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.300 - 2.461
R-factor0.1886
Rwork0.188
R-free0.22810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4i55
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.490
High resolution limit [Å]2.4506.6502.450
Rmerge0.1410.0910.809
Rmeas0.1530.0990.880
Rpim0.0590.0390.343
Total number of observations722222
Number of reflections11036658615451
<I/σ(I)>3.5
Completeness [%]99.999.599.6
Redundancy6.56.16.4
CC(1/2)0.9910.741
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.72776% PEG, 5% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCL2, pH 6.7

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon