7D5X
Bovine heart cytochrome c oxidase in a catalytic intermediate, IO10, at 1.74 angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 50 |
Detector technology | CCD |
Collection date | 2014-11-09 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.90 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 181.767, 203.304, 177.566 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.699 - 1.740 |
R-factor | 0.1573 |
Rwork | 0.156 |
R-free | 0.18360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5b1a |
RMSD bond length | 0.020 |
RMSD bond angle | 1.850 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | DM |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 137.000 | 1.760 |
High resolution limit [Å] | 1.740 | 1.740 |
Rmerge | 0.112 | |
Rpim | 0.033 | 0.362 |
Number of reflections | 663784 | 16459 |
<I/σ(I)> | 30.6 | 1.5 |
Completeness [%] | 99.8 | |
Redundancy | 8.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 6.7 | 277 | PEG 4000, Sodium Phosphate Buffer |