7D4A
The Crystal Structure of human JMJD2A Tudor domain from Biortus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.976253 |
Spacegroup name | I 41 3 2 |
Unit cell lengths | 135.110, 135.110, 135.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.219 - 2.201 |
Rwork | 0.230 |
R-free | 0.27220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gf7 |
RMSD bond length | 0.004 |
RMSD bond angle | 1.255 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.560 | 2.260 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.129 | 2.749 |
Number of reflections | 11007 | 836 |
<I/σ(I)> | 21.4 | |
Completeness [%] | 99.9 | |
Redundancy | 41.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M NaCl, 0.1M HEPES pH7.5, 1.6M (NH4)2SO4 |