7D1F
Structure of the CYP102A1 Haem Domain with N-enanthyl-L-prolyl-L-phenylalanine in complex with Methylamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-07-27 |
Detector | RAYONIX MX225-HS |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.474, 127.338, 147.759 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.230 - 1.450 |
R-factor | 0.1444 |
Rwork | 0.143 |
R-free | 0.17400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xa3 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.566 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP (11.7.02) |
Refinement software | REFMAC (5.8.0266) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.230 | 48.230 | 1.470 |
High resolution limit [Å] | 1.450 | 7.940 | 1.450 |
Rmerge | 0.072 | 0.021 | 2.047 |
Rmeas | 0.075 | 0.022 | 2.150 |
Rpim | 0.020 | 0.006 | 0.642 |
Number of reflections | 193978 | 1353 | 8610 |
<I/σ(I)> | 19.7 | 74.8 | 1.3 |
Completeness [%] | 99.3 | 99 | 90.3 |
Redundancy | 14.4 | 12.9 | 10.6 |
CC(1/2) | 1.000 | 1.000 | 0.554 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 293 | PEG 8000, Magnesium Chloride, Tris-HCl, 0.5 % DMSO, 200 uM N-Enanthyl-L-prolyl-L-phenylalanine, 500 uM Methylamine |