Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7D1C

Crystal structure of mouse Cryptochrome 1 in complex with compound TH303

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-05
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths45.078, 79.148, 133.139
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.700 - 1.910
R-factor0.1897
Rwork0.188
R-free0.21770
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6kx4
RMSD bond length0.004
RMSD bond angle0.593
Data reduction softwarexia2 (0.6.467)
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.7802.000
High resolution limit [Å]1.9001.900
Rmerge0.1170.400
Rmeas0.1330.453
Rpim0.0620.208
Number of reflections375885359
<I/σ(I)>7.12.9
Completeness [%]99.198.3
Redundancy4.64.7
CC(1/2)0.9900.837
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.25 M NH4Cl, 23% PEG w/v 3350, 3% v/v Ethylene glycol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon