7D1C
Crystal structure of mouse Cryptochrome 1 in complex with compound TH303
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.078, 79.148, 133.139 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.700 - 1.910 |
R-factor | 0.1897 |
Rwork | 0.188 |
R-free | 0.21770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kx4 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.593 |
Data reduction software | xia2 (0.6.467) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.780 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.117 | 0.400 |
Rmeas | 0.133 | 0.453 |
Rpim | 0.062 | 0.208 |
Number of reflections | 37588 | 5359 |
<I/σ(I)> | 7.1 | 2.9 |
Completeness [%] | 99.1 | 98.3 |
Redundancy | 4.6 | 4.7 |
CC(1/2) | 0.990 | 0.837 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.25 M NH4Cl, 23% PEG w/v 3350, 3% v/v Ethylene glycol |