7CZ0
Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb92)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-12 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97930 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 95.245, 130.154, 171.453 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.620 - 2.770 |
R-factor | 0.2042 |
Rwork | 0.202 |
R-free | 0.24060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6lz2 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.716 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.620 | 2.850 |
High resolution limit [Å] | 2.770 | 2.770 |
Rmerge | 0.148 | 1.147 |
Rpim | 0.062 | 0.651 |
Number of reflections | 54942 | 4418 |
<I/σ(I)> | 9.2 | 1.7 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 6.7 | 7 |
CC(1/2) | 0.997 | 0.780 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 14.4 %(w/v) PEG 8000, 160mM calcium acetate, 20% (v/v) glycerol, 80mM sodium cacodylate / HCl pH 6.5 |