7CUP
Structure of 2,5-dihydroxypridine Dioxygenase from Pseudomonas putida KT2440
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97892 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 125.961, 143.750, 118.690 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.410 - 2.000 |
R-factor | 0.1718 |
Rwork | 0.171 |
R-free | 0.21340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7cnt |
RMSD bond length | 0.010 |
RMSD bond angle | 1.625 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 2.000 |
Number of reflections | 142933 | 6863 |
<I/σ(I)> | 25 | |
Completeness [%] | 100.0 | |
Redundancy | 12.3 | |
CC(1/2) | 1.000 | 0.972 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% PEG3350 0.2 M Succinic acid pH 7.0 |