7CM9
DMSP lyase DddX
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL18U1 |
| Synchrotron site | SSRF |
| Beamline | BL18U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-11-05 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.979 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 143.565, 88.798, 273.263 |
| Unit cell angles | 90.00, 99.94, 90.00 |
Refinement procedure
| Resolution | 30.676 - 2.249 |
| R-factor | 0.1865 |
| Rwork | 0.184 |
| R-free | 0.22970 |
| Structure solution method | SAD |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.100 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.6.4_486) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.290 |
| High resolution limit [Å] | 2.249 | 6.100 | 2.250 |
| Rmerge | 0.083 | 0.060 | 0.415 |
| Rmeas | 0.099 | 0.072 | 0.491 |
| Rpim | 0.054 | 0.039 | 0.261 |
| Number of reflections | 156349 | 8217 | 7721 |
| <I/σ(I)> | 4.8 | ||
| Completeness [%] | 97.3 | 99.2 | 95.9 |
| Redundancy | 3.2 | 3.3 | 3.3 |
| CC(1/2) | 0.992 | 0.816 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M lithium sulfate monohydrate, 0.1 M sodium citrate tribasic dihydrate (pH 5.5) and 20% (wt/vol) polyethylene glycol (PEG) 1000 |
