7CLJ
Crystal structure of Thermoplasmatales archaeon heliorhodopsin E108D mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-30 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.000 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 72.860, 72.860, 115.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.368 - 2.600 |
Rwork | 0.222 |
R-free | 0.28340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6is6 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.359 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.760 |
High resolution limit [Å] | 2.600 | 7.580 | 2.600 |
Rmeas | 0.380 | 0.121 | 1.806 |
Number of reflections | 9975 | 464 | 1530 |
<I/σ(I)> | 5.36 | 15.99 | 1.04 |
Completeness [%] | 99.1 | 96.5 | 98.6 |
Redundancy | 7.71 | 7.26 | 7.6 |
CC(1/2) | 0.982 | 0.997 | 0.484 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5 | 293 | 25% PEG 350 MME, 100mM Na-citrate, 100mM ammonium sulfate or lithium sulfate |