7CJM
SARS CoV-2 PLpro in complex with GRL0617
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-28 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.54 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 112.294, 112.294, 220.379 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.300 - 3.200 |
R-factor | 0.269 |
Rwork | 0.268 |
R-free | 0.28590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wrh |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 22.300 | 3.314 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.190 | 0.487 |
Rmeas | 0.207 | 0.529 |
Rpim | 0.203 | |
Number of reflections | 11963 | 1180 |
<I/σ(I)> | 12.92 | 4.27 |
Completeness [%] | 99.0 | 99.83 |
Redundancy | 6.3 | 6.6 |
CC(1/2) | 0.980 | 0.931 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 283 | 12% PEG 3350, 0.1M Tris pH 7.5, 0.005M Cobalt(II) chloride hexahydrate, 0.005M Cadmium chloride hemi(pentahydrate), 0.005M Magnesium chloride hexahydrate, 0.005M Nickel(II) chloride hexahydrate |