7CJ5
Crystal structure of homo dimeric D-allulose 3-epimerase from Methylomonas sp. in complex with D-fructose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-11-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.420, 70.540, 140.220 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.940 - 1.800 |
R-factor | 0.127 |
Rwork | 0.126 |
R-free | 0.15900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5zfs |
RMSD bond length | 0.005 |
RMSD bond angle | 1.217 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.940 | 1.850 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.065 | 0.522 |
Rmeas | 0.070 | 0.017 |
Total number of observations | 305959 | |
Number of reflections | 42687 | 530 |
<I/σ(I)> | 23.22 | 3.64 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.167 | 7.3 |
CC(1/2) | 0.999 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | magnesium chloride, Tris, PEG3350 |