7CFP
Crystal structure of WDR5 in complex with a H3Q5ser peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL18U1 |
| Synchrotron site | SSRF |
| Beamline | BL18U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-11-07 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.979 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 78.748, 99.411, 80.615 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.060 - 1.600 |
| R-factor | 0.1755 |
| Rwork | 0.174 |
| R-free | 0.19940 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2gnq |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.511 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.630 |
| High resolution limit [Å] | 1.600 | 4.340 | 1.600 |
| Rmerge | 0.079 | 0.053 | 0.612 |
| Rmeas | 0.082 | 0.055 | 0.639 |
| Rpim | 0.023 | 0.016 | 0.183 |
| Total number of observations | 523644 | ||
| Number of reflections | 42035 | 2262 | 2089 |
| <I/σ(I)> | 5.5 | ||
| Completeness [%] | 100.0 | 100 | 100 |
| Redundancy | 12.5 | 11.9 | 12.1 |
| CC(1/2) | 0.996 | 0.947 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 295 | 0.1% Octylglucoside, 0.1M Sodium citrate tribasic dihydrate pH 5.5, 22% PEG 3350 |
