7C9P
Crystal structure of rice histone-fold dimer GHD8/OsNF-YC2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-01-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97946 |
Spacegroup name | P 61 |
Unit cell lengths | 89.267, 89.267, 81.341 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.650 - 2.000 |
R-factor | 0.173 |
Rwork | 0.171 |
R-free | 0.21460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7c9o |
RMSD bond length | 0.007 |
RMSD bond angle | 0.853 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.082 | 0.580 |
Rmeas | 0.086 | 0.608 |
Rpim | 0.026 | 0.181 |
Number of reflections | 25020 | 1825 |
<I/σ(I)> | 21.2 | 5.3 |
Completeness [%] | 99.7 | |
Redundancy | 10.8 | |
CC(1/2) | 0.998 | 0.918 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | PEG 3350, sodium malonate, sodium citrate tribasic dihydrate |