7C88
Complex structure of JS003 and PD-L1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-10-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97890 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 107.984, 65.639, 107.529 |
Unit cell angles | 90.00, 114.47, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.997 |
R-factor | 0.224 |
Rwork | 0.222 |
R-free | 0.25760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5grj |
RMSD bond length | 0.006 |
RMSD bond angle | 0.939 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.16_3549: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 4.310 |
High resolution limit [Å] | 1.996 | 2.000 |
Number of reflections | 86422 | 93009 |
<I/σ(I)> | 1.74 | |
Completeness [%] | 92.6 | |
Redundancy | 5.3 | |
CC(1/2) | 0.990 | 0.872 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1M Na HEPES 7.0, 15% w/v PEG 20000 |