7C7B
Crystal structure of human TRAP1 with SJT009
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-08 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9795 |
Spacegroup name | H 3 |
Unit cell lengths | 109.597, 109.597, 59.895 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 24.099 - 1.500 |
R-factor | 0.175029741535 |
Rwork | 0.173 |
R-free | 0.20589 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5y3n |
RMSD bond length | 0.008 |
RMSD bond angle | 1.084 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.046 | 0.369 |
Number of reflections | 42470 | 42470 |
<I/σ(I)> | 32.7 | |
Completeness [%] | 99.2 | |
Redundancy | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 0.1M Na-acetate pH 4.6, 0.1M Ammonium acetate, 33% PEG 4000 |